Supporting Reasoning within Use Case WP7b
May 31rd, 2011, 12:00 - 13:00 CET
Participants: Gaston(VUA), Zhisheng (VUA), Mark (UFSD), Matthias (HLRS), regret: Angus (UFSD)
Agenda
- LarKC 2.5 and Plugin development
- Keyword Extension Reasoner Plug-in
- Previous implementation of GWAS Plug-in and Workflow
- GWAS plug-ins and workflow with LarKC2.5
- Dissemination Issue: ISWC2011 poster
- Next Teleconference
Minutes
- LarKC 2.5 and Plugin development
Gaston: how to obtain the result of the plugin (for the html interface)
Matthias: make the correct variable binding as the output of the plug-in.
Matthias: update to the latest LarKC 2.5.
Gaston: why do we need to read the plugin parameters in both invoking and initialization?
Matthias: first time to hear that. use protected, not private constants.
- Keyword Extension Reasoner Plug-in
Zhisheng: are the existing input and output of the reasoner plug-in OK for the other plug-ins in the GWAS workflow?
Gaston: existing output format:
(_:k1, urn:larkc.keywordreasoner.results.keyword.name, "nipple") (_:k1, urn:larkc.keywordreasoner.results.keyword.uri, "http://org.snu.bike/MeSH#nipple") (_:k1, urn:larkc.keywordreasoner.results.keyword.cl, "1"^^<http://www.w3.org/2001/XMLSchema#int>) (_:k1, urn:larkc.keywordreasoner.results.keyword.sd, "-1.0"^^<http://www.w3.org/2001/XMLSchema#double>) (_:k2, urn:larkc.keywordreasoner.results.keyword.name, "human mammary gland") (_:k2, urn:larkc.keywordreasoner.results.keyword.uri, "http://org.snu.bike/MeSH#human_mammary_gland") (_:k2, urn:larkc.keywordreasoner.results.keyword.cl, "1"^^<http://www.w3.org/2001/XMLSchema#int>) (_:k2, urn:larkc.keywordreasoner.results.keyword.sd, "-1.0"^^<http://www.w3.org/2001/XMLSchema#double>)
Gaston: the wiki page for the information: http://wiki.larkc.eu/LarkcPlugins/KeywordReasoner
Mark: it is fine to make a temporary file for the keyword list.
- Previous implementation of GWAS Plug-in and Workflow
Mark sent the link of the previous implementation and the dataset for download.
- GWAS plug-ins and workflow with LarKC2.5
Mark:Immigration of the previous plug-ins into LarKC 2.5 will be done in coming few weeks.
Gaston is going to update the reasoner plug-in today.
- Dissemination Issue: ISWC2011 poster
Mark: good idea. We should do it after the GWAS workflow works.
- Next Teleconference
14 June, 2011, 12:00(CET, 11:00 UK time). Going to check it with Angus.